AT1G52530.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.838 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:19569045..19570004 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 35569.00 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 8.87 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||
Length | 319 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKFKAFLTEN GVNLLEKRFL PAFDKMGKNC HLLLTKEHLF FLHNLLNGDG VQCIAQFRKD VLFDDYRISS QNEDRIAFSL DVALLYRAVK SSVSICTEFS 101: GGLASNRLQI KLVKKLPPNC TQPMPFLTFE TKGYKSAVIQ DVPITKPLSR SQVIELQTAL DSAQDLPPTL VQVQDSNQLQ NFVDHMRHVG DVLNVTISKH 201: GDLQVQVSTT LIRLGIEFQR LSVIGEKSQA PVEDRNLSAQ ARSERAIARG DAQSVQVSVK HFSKSLQCHL TKPDSTFYGI APQGACLTVI FQFMVPGTRQ 301: TDKSISLHCR LPVLDPGSN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)