AT1G52370.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Ribosomal protein L22p/L17e family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1); Has 8369 Blast hits to 8369 proteins in 2950 species: Archae - 0; Bacteria - 5662; Metazoa - 124; Fungi - 79; Plants - 621; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:19507052..19508699 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 30158.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 11.25 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 269 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAGWQKNLQI VIRQVGKRVK DSHISTANYS STRNLESPFS QGYLQSLLRS TYSSRPLYYH LQQLGISTSR QLQAGEEPVS SPLSSPALLG SGKEEEQKII 101: PKRQKVQAVL KSIKQSPKKV NLVAALVRGM RVEDALMQLQ VTVKRASQTV YRVIHAARAN ATHNHGLDPD RLLVAEAFVG KGLFGKKVAY HAKGRSGIIS 201: IPRCRLTVIV RETTAEEEAE IARLKVHNFK KLNKRQRQLV PHKLIETSPI WNRRGTKGNH RSSELVPSH |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)