AT1G51590.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.620 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha-mannosidase 1 | ||||||||||||
| Curator Summary (TAIR10) |
Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation. | ||||||||||||
| Computational Description (TAIR10) |
alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19128315..19131406 | ||||||||||||
| Molecular Weight (calculated) | 51351.70 Da | ||||||||||||
| IEP (calculated) | 5.10 | ||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||
| Length | 456 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIHAWSSYEK YAWGKDELQP RTKDGTDSFG GLGATMVDSL DTLYIMGLDE QFQKAREWVA SSLDFDKDYD ASMFETTIRV VGGLLSAYDL SGDKMFLEKA 101: KDIADRLLPA WNTPTGIPYN IINLRNGNAH NPSWAAGGDS ILADSGTEQL EFIALSQRTG DPKYQQKVEK VITELNKNFP ADGLLPIYIN PDNANPSYST 201: TTFGAMGDSF YEYLLKVWVQ GNKTSAVKPY RDMWEKSMKG LLSLVKKSTP SSFTYICEKN GNNLIDKMDE LACFAPGMLA LGASGYGPDE EKKFLSLAGE 301: LAWTCYNFYQ STPTKLAGEN YFFTAGQDMS VGTSWNILRP ETVESLFYLW RLTGNKTYQE WGWNIFQAFE KNSRVESGYV GLKDVNTGAK DNKMQSFFLA 401: ETLKYLYLLF SPSSVISLDE WVFNTEAHPL KIVARNDPRK PTIALRQRKF GHQINV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)