AT1G51538.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aminotransferase-like, plant mobile domain family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G50830.1); Has 1047 Blast hits to 1018 proteins in 89 species: Archae - 0; Bacteria - 9; Metazoa - 109; Fungi - 28; Plants - 745; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19113183..19115273 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79941.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.85 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||
| Length | 696 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMDSSKESSL IETHFLKPYV TSIDGAVAEL PRHRLSVSSS DLNESFSRIS FNGFWSAQPN FKSWAKKMEA LHEPIWRKAG IFEAIKASMY KIRKNQSLLL 101: ALVEKWCPET KSFLFPWGEA TITLEDVLVL LGFSVQGSPV FAPLESSEMR DSVEKLEKAR LENRGQDGLV RQNLWVSSFL GRGDQMEHEA FLAFWLSQFV 201: FPDMCRRSIS TKVLPMAVRL ARGERIAFAP AVLARLYRDL GQIQASAREK STPNVTLKSL FKLVQLWAWE RFKSTSPKAR VIPKGEPRIS RWHSQTSKNV 301: RLNLVDFDWR PYTKPLQIWN PPRFYPEEAM WMTVDDNLDD GFVSFARCMR VSQLVGVGIV EDYYPNRVAM QFGLAQDLPG LVTDHSSFTE KEAWDGYNKS 401: LDGLMLYIPS RVATTSVTER YRDWWLKSIS KFFLDSSEST ETFDASNTID HYDNNDEDDE LLPLGQVLQN FGESFLKKLE RCRARRLAKN HRFKINKDKI 501: GDGGASASTE LPLSQLFKKE VMKRTSEHLK NKGRKRARED DVSSMDHKDD DVTIAQMIKS RRNDECGSKG KKSSMVQRPS NENNSSDPLV DSNGGIIDIS 601: VSPSETRQTC DDELHVDRSK KEELVHEDEE KQRSNENLCS EAEKEEDIDE RLKQRKLAIE EIALKLETRV MEVEKSLTMI RKWKTRGNQT NHRVSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)