AT1G51300.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.539 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G20060.3); Has 403 Blast hits to 401 proteins in 109 species: Archae - 0; Bacteria - 69; Metazoa - 199; Fungi - 6; Plants - 109; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:19014260..19016103 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23284.20 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 9.52 | ||||||||||||||||||||||||||||
GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||
Length | 212 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MASGSTRAKV TAEFHSKKKV TTEFGDTVTV TPRARHQATI VWLHDLNESG YDSSELVKSF SLYNVKWICP SSPLISNVGF GGAPARACKI SLLQNFKEEH 101: AISIHRGFKV NEFSSRMPDP YEMEGLKNSA AHVAGLLKNE PENVMKGVAG YGIGGALALH IATCYALGSF PIQIRAVVGI NCWLPNRFIP FVGLAVSHRR 201: LSFCRCRILV FE |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)