AT1G51150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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| FP Images |
Arabidopsis cell culture (mitochondrial marker)
Arabidopsis cell culture (plastidal marker)
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DegP protease 6 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative DegP protease. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
DegP protease 6 (DegP6); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254); BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT5G54745.1); Has 545 Blast hits to 544 proteins in 132 species: Archae - 6; Bacteria - 188; Metazoa - 9; Fungi - 0; Plants - 191; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18948370..18949290 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24610.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.81 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||
| Length | 219 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFRSVHHIV ARFSNSTSTP IHRFFYSPSL LRRRSSFNAS LISRCCSSVS DVDVARDAVV KIFSFSREPN VVQPWQTTEK EYSSSGFAIS GRRILTNAHV 101: VGDHLYLQVR KHGSPTKYKA EVKAFRYGCD LAILGIDSEE FWEDINPLEL GGIPFIGETV YALGYPRGGD TISVTKGIVT RVEPQKYSHS SIKMYVYTSG 201: GSTNKFYSGQ INKKIYDGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)