AT1G51040.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.980 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, phosphoinositide binding; INVOLVED IN: phosphoinositide biosynthetic process, signal transduction; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 2115 Blast hits to 2070 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 990; Fungi - 393; Plants - 218; Viruses - 4; Other Eukaryotes - 510 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:18920658..18923314 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 59293.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.95 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 525 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MERLNELCDI IEQNPKQFLD KLPWICQQCP QSKLLRAESP RFSQSHLNAI LAVTRILSKI VDTTDENAKF VVLDFLQTVP KSFHRSFWPY SLSLESISAF 101: YCSFLGYVSC LSQLMVEGYL LRAAQRSDIF AHTLIWHLQG ESVEEIVKDG AFDKNASFQE ILSDVRQHIV DGFTPKALNF FSREFDFFEK VTSISGALLP 201: LPKEERVAGI RRELEKIKMQ GEDLYLPTAP NKLVRVIQVD SGIPLQSAAK VPIMITFNVV DLDGDHNDVK PQACIFKVGD DCRQDVLALQ VISLLGDIFQ 301: AVGLNLYLFP YGVLPTVVPN TRSRSQMGET TDGGLYEIFQ QNYGLVGSTT FETARANFLI SSAGYAVASL LLQPKDRHNG NLLFDDVGRL VHIDFGFILE 401: TSPGGNMRFE NAHFKLSHEM TQLLDPSGVM KSKTWHQFVS LCVKGYLAAR RYMDEIISTV QMMLESGLPC FSRGDPIGNL RKRFHPEMSE REAALFMINV 501: CTDAYNKWTT AGYDLIQYLQ QGVEK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)