AT1G50990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.555 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with tetratricopeptide repeat domain | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 1 (TAIR:AT4G35230.1); Has 36616 Blast hits to 36181 proteins in 1497 species: Archae - 12; Bacteria - 2984; Metazoa - 8327; Fungi - 618; Plants - 22250; Viruses - 102; Other Eukaryotes - 2323 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:18902930..18905204 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57613.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.60 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||
| Length | 507 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK 101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD 201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED 301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI 401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI 501: LEDKRGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)