AT1G50580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.660 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G29630.1); Has 5113 Blast hits to 5079 proteins in 305 species: Archae - 0; Bacteria - 165; Metazoa - 326; Fungi - 12; Plants - 4590; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:18730831..18732177 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50467.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.20 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 448 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSKFHAFMY PWFGFGHMIP YLHLANKLAE KGHRVTFFLP KKAHKQLQPL NLFPDSIVFE PLTLPPVDGL PFGAETASDL PNSTKKPIFV AMDLLRDQIE 101: AKVRALKPDL IFFDFVHWVP EMAEEFGIKS VNYQIISAAC VAMVLAPRAE LGFPPPDYPL SKVALRGHEA NVCSLFANSH ELFGLITKGL KNCDVVSIRT 201: CVELEGKLCG FIEKECQKKL LLTGPMLPEP QNKSGKFLED RWNHWLNGFE PGSVVFCAFG TQFFFEKDQF QEFCLGMELM GLPFLISVMP PKGSPTVQEA 301: LPKGFEERVK KHGIVWEGWL EQPLILSHPS VGCFVNHCGF GSMWESLVSD CQIVFIPQLA DQVLITRLLT EELEVSVKVQ REDSGWFSKE DLRDTVKSVM 401: DIDSEIGNLV KRNHKKLKET LVSPGLLSGY ADKFVEALEI EVNNTKFS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)