AT1G49640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G49650.1); Has 9471 Blast hits to 9453 proteins in 1524 species: Archae - 114; Bacteria - 5581; Metazoa - 494; Fungi - 821; Plants - 1350; Viruses - 5; Other Eukaryotes - 1106 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18375697..18376644 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35430.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.94 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||
| Length | 315 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESDLTTEHH LPFIRIHKNG RVERLSGNDI KPTSLNPQND VVSKDVMYSS DHNLSVRMFL PNKSRKLDTA GNKIPLLIYF HGGAYIIQSP FSPVYHNYLT 101: EVVITANCLA VSVQYRLAPE HPVPAAYDDS WSAIQWIFSH SDDWINEYAD FDRVFIAGDS AGANISHHMG IRAGKEKLSP TIKGIVMVHP GFWGKEPIDE 201: HDVQDGEVRN KIAYIWENIV SPNSVDGVND PWFNVVGSGS DVSEMGCEKV LVAVAGKDVF WRQGLAYAAK LEKSQWKGSV EVIEEEEEGH CFHLHNHNSQ 301: NASKLMQKFL EFIIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)