AT1G48700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.501 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G43660.1); Has 364 Blast hits to 363 proteins in 61 species: Archae - 0; Bacteria - 16; Metazoa - 230; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18011285..18012823 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34110.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||
| Length | 291 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFQAKRRKTY RQEIISNYQP RFKGLYKLDP KLFLLPSFRK AISENTEESF RRIISEPFPG VFVFKMFQPD FSEKLLLEVE NFRKWANETN FTIRRPDNTS 101: KYGVVLDDFG LDIMLKQLMD DFIFPICKVF FPEVCGTMFD SHYGFFIENG EDRDADVGFH VEDSDITLNV CLSKQGEGGE ILFAGARCNK HMDIDPKPEE 201: YFDYCHIPGQ AILHRGCHVH GARATASGRR ANMILWCQNS LFREMQTYEP EFSDWCGQCV HEEKENKSQI LAVKRKEMFR IESEAEPPRK K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)