AT1G48530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: proteasome inhibitor-related (TAIR:AT3G53970.2); Has 43 Blast hits to 43 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17943508..17944220 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 19391.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.04 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||
| Length | 175 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLTRTPQTE SMATTHAVMG VIRSVMPAFR NKNDKIAFVV HASLAVSGFI LTSTGRPAFA HDALSSSTTQ CLVGIEGWNE FDEEYAFVYK CPVKRYLVKC 101: LAMNDKLLVD AIAEDGKEFG HLQIEVGNYI DESGEEGDYD TQFKNFDKLV TELKSEILCK LNTVSTTTKS SSETK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)