AT1G48510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Surfeit locus 1 cytochrome c oxidase biogenesis protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Surfeit locus 1 cytochrome c oxidase biogenesis protein; CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT3G17910.1); Has 339 Blast hits to 337 proteins in 81 species: Archae - 0; Bacteria - 17; Metazoa - 64; Fungi - 36; Plants - 44; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17934889..17936651 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43187.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.74 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||
| Length | 384 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTKLVSKIFK RLISQSQYMS SSTTSNLPAA SQTSNLESQL LSSAPPPAKK KRGSALLWYL VGFTTYGLGE TYKFLQTQVE HLDSRKQCLE MKPMKLNTTK 101: DLDGLGFRRV VCKGIFDEQR SIYVGPKPRS MSKSSEIGFY VITPLLPIPN EPNSMKSPIL VNRGWVPSDW KENSLESLGT GGLVAAAKES RKANKLLSSQ 201: QSLLSKFWYK LNNPMIVEDQ VSRAMHVEVV GVVRKSETPG IYTLVNYPSS LAWFYLDVPK LALAMGFGED TMYIESTYTD MDESRTYPVP RDVENLTRSK 301: DIPLDYHLYT VLWHWSSLTC FIKASSILMR RLTKSDPIGV EPILIPISIL VFICTKIYSL RNLFCKIDTI GVGCVTKLDT GKVK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)