AT1G48220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.663 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48210.2); Has 90547 Blast hits to 89678 proteins in 4278 species: Archae - 96; Bacteria - 10482; Metazoa - 33899; Fungi - 5804; Plants - 28872; Viruses - 261; Other Eukaryotes - 11133 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17802863..17804882 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40174.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.63 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 364 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSCFGWCGSE DVRNPADTGP SQAHNSIGYN GRHHQRADPP MNQPVVNMQP IAVPAIPVDE LEDITENFSS EVLVGKGSYG RVFYGVLKSG KEAAIKKLYP 101: TKQPDQEFLS QVSMVSRLHH ENVVALMAYC VDGPLRVLAY EFATYGTLHD VLHGQTGVIG ALQGPVMTWQ RRVKIALGAA RGLEYLHKKV NPQVIHRDIK 201: ASNILLFDDD IAKIGDFDLY DQAPNMAGRL HSCRMALGAS RSHCPEHAMT GILTTKSDVY SFGVVLLELL TGRKPVDRTL PRGQQNLVTW ATPKLSKDKV 301: KQCVDARLLG EYPPKAVAKL AAVSARCVHY DPDFRPDMSI VVKALQPLLN SSRSSPQTPH WNPY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)