AT1G48070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.933 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thioredoxin superfamily protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17730568..17731103 | ||||||||||||||||||||
| Molecular Weight (calculated) | 15884.20 Da | ||||||||||||||||||||
| IEP (calculated) | 3.91 | ||||||||||||||||||||
| GRAVY (calculated) | 0.32 | ||||||||||||||||||||
| Length | 144 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLMYLVGSGF SQGEVTWLSN EVEWRLILTT TQLPIVVTVT SSLCDDRCTI LDDQLARLSE TYGNLIILRK ANILTNPFFA ILYNLVNAPI IIVFQTGKEI 101: ARLENDLSWG AITDIIDNLS LFAPPPSDFV QPPSDSAPVP SLGE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)