AT1G46696.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF601 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function, DUF601; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF601 (InterPro:IPR006736); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF601 (TAIR:AT2G15110.1); Has 2393 Blast hits to 1960 proteins in 383 species: Archae - 25; Bacteria - 366; Metazoa - 883; Fungi - 248; Plants - 130; Viruses - 13; Other Eukaryotes - 728 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17261860..17264183 | ||||||||||||||||||||
| Molecular Weight (calculated) | 68588.40 Da | ||||||||||||||||||||
| IEP (calculated) | 8.05 | ||||||||||||||||||||
| GRAVY (calculated) | -0.67 | ||||||||||||||||||||
| Length | 616 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPPRKVVREV FLMDGKFGKY QTSLSTSSRL SLLRGAHQIP RQIQLISPEP TVCPENPPPG HTCAFEIFFS LCGLYFPLPD VLIDLMHEFG IALPQLCPNL 101: YAVKKGRTKG TFFLSPRKGF RVFDDFPDKD EQWRKSYFFF PVNELTYGNK TGLFVSEWAA RTVKVSTPPV SHTFAAHFSN FCRQDLAEKD KARIKSDRTV 201: MAGTLEDSKL RSLEKTKYQP SDSGSRPETP TSVSAGKKPE TPTSGSGKAL KDPAGKDPEK RAADKKRKQP EEISHSPPRS SRPRQEEKGA KLKGVVEDAP 301: QNLVVLSSRE SETRESERRN VPLPAPPMTF ADTMRTLVPP GSAIAPFDEM KEVNKDNYLR FAGKLGKVKP ELNQYPLCPS TPFSAATSFK RNEDENAKAV 401: EKANKVMNRM KAAELQVQKL EVNNIDLTAK LEAGKNAYLD AVDKETQARA DLKACEEKLK KMEEEQAALI AAARTDERRK VRAQFHDFSS KYGNFFKESE 501: EVETLKVRAA EAKANRELLE EIEKGEIPDL SKELESVRAD EEKFARQAAE PKTPHPDPTE LISLLADTPP EVVVESIPSA EVVVIDEGGS NKGSASEARI 601: AAMFPVDVEK DSGRAE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)