AT1G45191.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyl hydrolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
beta-glucosidase related protein, similar to beta-glucosidase GI:3820531 from (Pinus contorta); contains Pfam profile: PF00232 Glycosyl hydrolase family 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
beta glucosidase 1 (BGLU1); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 2 (TAIR:AT4G22100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17116044..17119076 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58073.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDVLTLITM IVLLLLAFHG FGKCSSDLYS RSDFPEGFVF GAGISAYQWE GAVDEDGRKP SVWDTFLHCR KMDNGDIACD GYHKYKEDVQ LMAETGLHTF 101: RFSISWSRLI SNGRGSINPK GLQFYKNFIQ ELVKHGIEPH VTLHHYDFPQ YLEDDYGGWT NRKIIKDFTA YADVCFREFG NHVKFWTTIN EANIFTIGGY 201: NDGNSPPGRC SFPGRNCTLG NSSTETYIVG HNLLLAHASV SRLYKQKYKD IQGGSVGFSL FAMNFTPSTN SKDDEIATKR ANDFYLGWML EPLIYGDYPD 301: VMKRTIGSRL PVFSKEESEQ VKGSSDFIGV IHYLTALVTN IDINPSLSGI PDFNSDMVLS MRVRISRLPN SDEKCLIFFI TLSILEYIKQ SYGNPPVYIL 401: ENGKTMNQDL ELQQKDTPRI EYLDAYIGAV LKAVRNGSDT RGYFVWSFMD LYELLNGYKS SFGLYSVNFS DPHRKRSPKL SAHWYSGFLK GKPTFLGSQG 501: ITQLHSNFSS SR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)