AT1G44542.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cyclase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT4G34180.1); Has 1444 Blast hits to 1444 proteins in 543 species: Archae - 85; Bacteria - 1182; Metazoa - 21; Fungi - 4; Plants - 86; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:16865145..16866573 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30637.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.04 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||
| Length | 271 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYHLLIIITT LSFSSINITF AVDEAFPSIP TTFSVATKQH YDVKPIHHEV YDGERKIYDI SHQYTPELPV WESSEGLGNF LRLAVSMKNG SDANISKMEL 101: SVHSGTHVDA PGHFHDHYYE SGFDTDSLDL QILNGPALLV DVPRDKNISA EVMKSLHIPR GIRRVLFKTL NTDRRLMFKK EFDSSFVGFM VDGAKWLVEN 201: TDIKLVGLDY LSFAAYDEAP ATHRFILERR DIIPVEALKL DDVEVGMYTL HCLPLRLVGA EGAPTRCILI K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)