AT1G43610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G43600.1); Has 1619 Blast hits to 1616 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 248; Plants - 389; Viruses - 3; Other Eukaryotes - 482 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:16424578..16425345 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30250.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.19 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 255 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFVVTKHLLQ RRKRSSSSSS CYDDFFKRLQ NHGAWFKKHL TTQLFSVTKK KKLHLVLDLD HTLLHSVLVS DLSKREKYLL EETDSRQDLW RRNVDGYEFI 101: IKLRPFLHEF LLEANKLFTM HVYTMGSSSY AKQVLKLIDP DKVYFGKRVI TREASPFNKS LDLLAADKRR VVIVDDTVHV WPFHKRNLLQ ITKYIYFKVD 201: GTKWDSYAEA KKDESQSNGS LANVLKFLEV VHKRFEEDLG FKDLRLLIPC RQRCY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)