AT1G36920.1
Subcellular Consensus
(Prediction and Experimental) min: ![]() .
SUBAcon:endoplasmic reticulum 0.726 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : | ||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G05642.1); Has 26 Blast hits to 23 proteins in 5 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:13983516..13984389 | ||||||||||||||||||||
Molecular Weight (calculated) | 20184.20 Da | ||||||||||||||||||||
IEP (calculated) | 9.83 | ||||||||||||||||||||
GRAVY (calculated) | 0.13 | ||||||||||||||||||||
Length | 177 amino acids | ||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKLRVSLLLK VQQSCLIFSL KILGIHLLML PYGVNLQKMS TLILNLNHQV PFFLLGSLMK TLLYQGKGTV QSSKFTTKAY IHSPLPEILR FQEALCNEEP 101: RLAITEIKSS KSAHISKQSF HLSERKTIIE LMETNQVMTC NILASISLEP KASWFYIGCT LCFTKAKQYF NPKTEEI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)