AT1G35550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : elongation factor Tu C-terminal domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
elongation factor Tu C-terminal domain-containing protein; FUNCTIONS IN: GTP binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3); Has 14582 Blast hits to 14579 proteins in 8354 species: Archae - 286; Bacteria - 0; Metazoa - 9702; Fungi - 2891; Plants - 516; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:13112722..13113036 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 11578.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.04 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||
| Length | 104 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNHLGQIKNG YTPVLDCHTS HIAVKFSEIL TKIDWRTGHE IEKEPKFLKN SEAAIINMTP TKPMVVEAYS AYPPLGRFAI RDMRQTVGVG VIKSVVKKDP 101: SGAK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)