AT1G35410.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.748 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1184) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1184 (InterPro:IPR009568), Uncharacterised conserved protein UCP031143 (InterPro:IPR016970); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1184) (TAIR:AT1G35400.1); Has 48 Blast hits to 36 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:13024161..13024941 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 17079.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||
| Length | 149 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYTTRSCQKT DLNKEKENQK EEAIRPGVKL SLFVAEAMFL LSDNLPFNIG VGGLNSIVLI LKNNNVVKSY SFEYYNQELK KLEEKLRSAK EFSEANGFVR 101: EEIKSNILHL WKSLFEATPE VRNSNKTIVL ELFSPIDNEV CCRLASLLI |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)