AT1G34490.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.929 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : MBOAT (membrane bound O-acyl transferase) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G34520.1); Has 686 Blast hits to 678 proteins in 232 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 39; Plants - 230; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:12609482..12610495 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39011.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.70 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.59 | ||||||||||||||||||||||||||||||||||||
| Length | 337 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEELKSFVK VWGSAIISVS YCYYIPSKIK RGVHRLLSVL PVCVLFLVLP LFFVFTIFSS TTAFCLSILA NFKLILFAFD KGPLLPLPTN LFRFICFTCL 101: PIKLQTKPNS QNHLPKWVLP SKVAIFVLLL NIRSYKILLP PILLLGLYPL HLYIVLDVLL TIVNALLTII LRCDLEPHFN EPYLATSLQD FWGHRWNLMV 201: SAIYRPGVYS PVRSVCQHQM RSDWARFMGC MTTFFVSGLI HELVYFYINR EKPTLEVTWF FVLHGVCTAM EIAVKRKMQW SLSPMLLRLI TVGFLVVTGD 301: LLFFGQIERS NMLERRANEA SLFIDFVKRK VFNYTVS |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)