suba logo
AT1G34400.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.980
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC023913EMBL:CP002684EnsemblPlants:AT1G34400EnsemblPlants:AT1G34400.1
entrez:840342GeneID:840342Gramene:AT1G34400.1KEGG:ath:AT1G34400
PIR:D86468Proteomes:UP000006548RefSeq:NP_174700.1TAIR:AT1G34400
UniGene:At.64019UniProt:Q9C8N8
Coordinates (TAIR10) chr1:-:12565992..12566615
Molecular Weight (calculated) 13215.20 Da
IEP (calculated) 7.60
GRAVY (calculated) 0.13
Length 121 amino acids
Sequence (TAIR10)
(BLAST)
001: MQPFVGTRST LHLLAETPLH PFLLKQPGFF MNAGRGRYTT YLLKGVEKPV VDVPTRPLEV VTDTATEAVM NKKDVVAEME EAVVVTRDIA KVTYHVEVVV
101: KKDTVVVAVR EVAGCYGGSG V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)