AT1G34290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 5 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 5 (RLP5); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G24650.1); Has 12271 Blast hits to 7700 proteins in 332 species: Archae - 6; Bacteria - 102; Metazoa - 104; Fungi - 0; Plants - 11794; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12498000..12498800 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30071.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.79 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.16 | ||||||||||||||||||||||||||||||||
| Length | 266 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MINYRHIVFC LCVMVVVDSR LTPYLAAIEQ VDPIVKIVLP IVGRFDPEEF VTSWQGNNPC EWFGTNCLEG IIIGISFISL NLIGTISPHF ADLTSLRVID 101: LSHNRLKCTI PFEITKLKNL TIVDVSYNQL HGEVPRVRGI VILTERNPNI ESTCLLVPSP TRNKNKPTVL VLLLGILVGL VVAGGASFGF YLYRIRKQPK 201: RLQEPNEAVT LTQQQSSDES LVSDESYVIS LQLQYRVLRR FSWVSKGPLL LTRQLKTNQN PHLPYM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)