AT1G33870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.953 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root, seed; EXPRESSED DURING: F mature embryo stage; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33900.1); Has 883 Blast hits to 769 proteins in 58 species: Archae - 0; Bacteria - 2; Metazoa - 714; Fungi - 0; Plants - 146; Viruses - 2; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:12301325..12302467 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28872.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||
| Length | 252 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFTSELQAGG VTMECVMYRT AIKDGPIINV IDTPGLFDSS VSANYITTEI LKCLTMAEGG IHAFMFVLSA GNRITQEEES TLDTLQLIFD SKILDYFIVV 101: FTGGDKLEAN EQTLDDYFSE GCPKFLTGVL RLCGGRKVVF NNMTKDKVKN AKQVKQLLAH VEAIEKNNGG KPYTNQMHRM IKEKGDKLRE QQRKVKSKKL 201: ASEIEVMKQD LELEHDEKMR RMTQLLERRL KQNSEAHERA MREMREAMRN YK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)