AT1G33770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10010.1); Has 124552 Blast hits to 123113 proteins in 4549 species: Archae - 90; Bacteria - 13991; Metazoa - 46983; Fungi - 12898; Plants - 30124; Viruses - 424; Other Eukaryotes - 20042 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12242126..12244462 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68472.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 614 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCICSKGAA EDEEGVVYHR EKANEYWNKS SSVQLIAPLP SNKDDFSHKA VDGSSGGGRR ASGLIVPIDD SHDGKTVIVE RPSRSQRGRR VSDNGKGGGL 101: IISNVPRSAE AELIAAGWPY WLTSVAGEAI KGWVPRRADS FEKLDKIGQG TYSIVYKARD LETGKIVAMK KVRFANMDPE SVRFMAREIN ILRKLDHPNV 201: MKLQCLVTSK LSGSLHLVFE YMEHDLSGLA LRPGVKFTEP QIKCFMKQLL CGLEHCHSRG ILHRDIKGSN LLVNNDGVLK IGDFGLASFY KPDQDQPLTS 301: RVVTLWYRAP ELLLGSTEYG PAIDLWSVGC ILAELFVCKP IMPGRTEVEQ MHKIFKLCGS PSEEFWNTTK FPQATSYKPQ HPYKRVLLET FKNLSSSSLD 401: LLDKLLSVEP EKRCSASSTL LSEFFTTEPL PCHISSLPKY PPSKELDAKV RDEEAKRKKA EAVKWRGHES VRRGLRDSKV TPEFIASGNS NVSLTTPSFK 501: KEKRFTDTNS VIHPSSRSNV GEVKPSRSNN VPATMGDYLA SSSQKENIVS RAPATTYMRK KNRMHYSGPL MPPGGNIEDM MKEHERRIQE AVRKSRLEKS 601: ATKKNKDISV KACA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)