AT1G33730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.488 cytosol 0.363 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 76, subfamily C, polypeptide 5 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP76C | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 76, subfamily C, polypeptide 5 (CYP76C5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 6 (TAIR:AT1G33720.1); Has 33978 Blast hits to 33882 proteins in 1749 species: Archae - 58; Bacteria - 4507; Metazoa - 11569; Fungi - 7344; Plants - 9104; Viruses - 6; Other Eukaryotes - 1390 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12227279..12228460 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41600.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.82 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 368 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTFTQLFSPQ RIEATKALRM KKVQELVNFL SESSERGEAV DISRASFVTA LNIISNILFS VNLGSYDSKN SSAFQEMVIG YMESIGNPDV SNFFPFMRLL 101: DLQGNSKKMK EYSGKLLQVF REFYDARILE NSSRIDEKDV SSRDFLDALI DLQQGDESEI NIDEIEHLLL DMFLAGTDTN SSTVEWAMTE LLGNPKTMTK 201: VQDEINRVIR QNGDVQESHI SKLPYLQAVI KETFRLHPAA PFLLPRKAER DVDILGFHVP KDSHVLVNVW AIGRDPNVWE NPTQFEPERF LGKDIDVKGT 301: NYELTPFGAG RRICPGLPLA LKTVHLMLAS LLYTFEWKLP NGVGSEDLDM GETFGLTVHK TNPLLACL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)