suba logo
AT1G33430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.494
plasma membrane 0.380
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Galactosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen exine formation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G32930.1); Has 1545 Blast hits to 1534 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 2; Plants - 571; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410XV5HeggNOG:KOG2288EMBL:KJ138973
EnsemblPlants:AT1G33430EnsemblPlants:AT1G33430.1entrez:840236ExpressionAtlas:W8QP76
GeneID:840236GO:GO:0005794GO:GO:0006486GO:GO:0008378
GO:GO:0016021Gramene:AT1G33430.1hmmpanther:PTHR11214hmmpanther:PTHR11214:SF125
InterPro:IPR002659InterPro:IPR025298KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-
KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-
KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-
KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-ncoils:Coil
PANTHER:PTHR11214PaxDb:W8QP76Pfam:PF01762Pfam:PF13334
Pfam:Q9C809PhylomeDB:W8QP76ProteinModelPortal:W8QP76RefSeq:NP_174609.1
STRING:3702.AT1G33430.2TMHMM:TMhelixUniGene:At.69763unipathway:UPA00378
UniProt:Q9C809UniProt:W8QP76
Coordinates (TAIR10) chr1:-:12124438..12126052
Molecular Weight (calculated) 44734.50 Da
IEP (calculated) 8.79
GRAVY (calculated) -0.44
Length 395 amino acids
Sequence (TAIR10)
(BLAST)
001: MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA
101: RTSDRSSEFW SERSAKNQSR LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD KAIDEEDSEH KDFLRLKHIE
201: GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL
301: ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)