AT1G32980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.408 mitochondrion 0.181 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G32970.1); Has 4764 Blast hits to 4742 proteins in 810 species: Archae - 105; Bacteria - 2583; Metazoa - 16; Fungi - 114; Plants - 1582; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11954278..11954850 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20326.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.19 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.15 | ||||||||||||||||||||||||||||
| Length | 190 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSGTSMSTP FVAGIVALLK SLHPHWSPAA IRSAIVTTAW RTDPSGEPIF ADGSNRKLAD PFDYGGGVVN SEKAAKPGLV YDMGVNDYVL YLCSVGYTDS 101: SITRLVRKKT VCANPKPSVL DLKLPSITIP NLAKEVIITR TVTNVGPVGS VYKAVIEAPM GVNVTVTPST LVFNAKTRKL SFKVRVFAIE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)