AT1G32970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10540.1); Has 6926 Blast hits to 6333 proteins in 1089 species: Archae - 225; Bacteria - 3981; Metazoa - 37; Fungi - 168; Plants - 1842; Viruses - 0; Other Eukaryotes - 673 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11948721..11951982 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79168.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||
| Length | 734 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTRALILVAI CLMLTLNNAA ETKVHIVYLG EKQHDDPDSV TESHHQMLWS ILGSKEAAHD SMTPWLLSFR SQTNQFPSES TLRFYELQTT RTWDYLQHTS 101: KHPKNILNQT NMGDQLIIGV VDSVTLNWFG FILLKQEYGQ SLNHSVTMVL DQYQNVGKEV QLGHAENPEY ISPRDFDGHG THVAATAAGS FVPDTNYLGL 201: GRGTARGGAP RARIAMYKAC WHLVTGATTC SAADLVKAID EAIHDGVDVL SISNGFSVPL FPEVDTQDGV AVGAFHAVAK GIPVVCAGGN AGPSSQTISN 301: TAPWIITVAA TTQDRSFPTF ITLGNNVTVV GQALYQGPDI DFTELVYPED SGASNETFYG VCEDLAKNPA HIIEEKIVLC FTKSTSYSTM IQAASDVVKL 401: DGYGVIVARN PGHQLSPCFG FPCLAVDYEL GTDILFYIRS TRSPVAKIQP TRTLVGLPVA TKVATFSSRG PNSISPAILK PDIAAPGVNI LAATSPNDTF 501: YDKGFAMKSG TSMSAPVVAG IVALLKSVHP HWSPAAIRSA IVTTAWRTDP SGEPIFADGS NRKLADPFDY GGGVVNSEKA ANPGLVYDMG VKDYILYLCS 601: VGYTDSSITG LVSKKTVCAN PKPSVLDLNL PSITIPNLAK EVTITRTVTN VGPVGSVYKP VIEAPMGVNV TVTPSTLVFN AYTRKLSFKV RVLTNHIVNT 701: GYYFGSLTWT DSVHNVVIPV SVRTQIMQRY YDEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)