AT1G32010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38190.1); Has 855 Blast hits to 714 proteins in 182 species: Archae - 16; Bacteria - 145; Metazoa - 265; Fungi - 59; Plants - 93; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11509341..11512040 | ||||||||||||||||||||
| Molecular Weight (calculated) | 93150.10 Da | ||||||||||||||||||||
| IEP (calculated) | 7.92 | ||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||
| Length | 835 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFSSPNNSV ASYIRERTPS DLSGKKSPSI GWSEESSRRS VGSSTHRGNS AEVPSSGIDR REISAIRDRV PSSSRVPTVV PCLRVNTDSD GAGNRYADDE 101: RESADENVSG ESRKNEMVDL GPTTSTRESV GQTTDFCLLP GPLTIRIPRD TDRPSDCPEG FICLFEGFFT ETGLRFPIPD FLMRFCRNRQ IAISQLTVAS 201: IRTAACLQML CARCGIPLSV ELMEELTSFS KVPHKLGQHY ISSVRGFKIL ENGPSKTRDW LGGYFYAKVD RNLVEDPSVE FRIEWNLDYA PNLRILRNCS 301: RRILDQAETL REQAPIDWKQ VPCLKHKKQN KRKPQKSSAR PKKMSGENVN LATLMREKRA RKEAESKARL AIVDKTHEDK ARLDVAEKNR KGLEDKTKKG 401: TFGAERRDVT DVTRVDKARP ITVGQKGSSG RSVDRERSGL DTSGSKRPCS SKEVVPALDK RRRIGSGDVD LSAGPRLLAN ADHSFRYEYK VRDSPFSADR 501: VECARFLRKV VGAPGEPEHE FLAEADLFEK WARAECQAVG ANNLLISRYD RNLRSAREKI LELEGKLKNA ERTIAYNNQQ AKADFEELKA LKKKIVVLKA 601: ERSKEAATLE NVLRQQTLLE ARLAEEKEIF RRFREEKFAE DMEKTRAELL NKYYERSEKI FRHIAETENA SHMVKMHAQA TGTLSCLKFL ADEDKIPIPA 701: STFEEFEDEA KEWKDKIDAF VVTELVNGGS VITPVAPHGS TENVLGSEES PFWINQFGSN LGVLAACEID PITEFFTDPK LAALVSAGVK KAIVTISDDE 801: PAAVITTEDG PVPASHAETA PTIGDSSVLA SNAEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)