AT1G31660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.600 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11331176..11333440 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51475.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.37 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||
| Length | 444 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKKRDRIVN TQPFISDDAS VASSRKRSKV PKTHQKQEKL IEAGMSEKIM KQALAQQKEV ADEENAERNP SSAAFAVAGA ATAGEEQKIL EEEEDDIDDF 101: DGTFENQSQF DKQEEINEDD EKLFESFLNK NAPPQRTLTD IIIKKLKDKD ADLAEEERPD PKMDPAITKL YKGVGKFMSE YTVGKLPKAF KLVTSMEHWE 201: DVLYLTEPEK WSPNALYQAT RIFASNLKDR QVQRFYNYVL LPRVREDIRK HKKLHFALYQ ALKKSLYKPS AFNQGILFPL CKSGTCNLRE AVIIGSILEK 301: CSIPMLHSCV ALNRLAEMDY CGTTSYFIKV LLEKKYCMPY RVLDALVAHF MRFVDDIRVM PVIWHQSLLT FVQRYKYEIL KEDKEHLQTL LQRQKHHLVT 401: PEILRELKDS RNRGEKEDPM VDNFAPVPAK EDRFDIPEVP MEED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)