AT1G31490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.921 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HXXXD-type acyl-transferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, quinone binding, primary amine oxidase activity, copper ion binding, transferase activity; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2275 Blast hits to 2263 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 38; Plants - 2233; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11271744..11273078 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49288.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.29 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||
| Length | 444 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKIFDVSFTG EFIVKASGDQ PEKVNSLNLS NFDLLSGRFP VTYFYFYPKQ PQLSFETIVK SLQSSLSQTL SYFYPFAGQI VPNETSQEEP MIICNNNGAL 101: FVEARAHVDL KSLDFYNLDA FLQSKLVQVN PDFSLQIQAT EFECGGLALT FTFDHALGDA SSFGKFLTLW SEISRNKPVS CVPDHRRNLL RARSPPRYDP 201: HLDKTFIKCS EEDIKNIPMS KTLIKRLYHI GASSLDALQA LATVNGESRT KIEAFSAYVW KKMVDSIESG HKTCKMGWLV DGRGRLETVT SSYIGNVLSI 301: AVGEASIENL KKNHVSDIAN IVHKSITEVT NDTHFTDLID WIESHRPGLM LARVVLGQEG PALVLSSGRR FPVAELDFGF GAPFLGTVCS TVEKIGVGYL 401: NQRPSACNDG SWSVSAIVWP ELATALESDS VFQPMSAKHL QLQT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)