AT1G31250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proline-rich family protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 24580 Blast hits to 9370 proteins in 816 species: Archae - 67; Bacteria - 3086; Metazoa - 5006; Fungi - 2268; Plants - 4246; Viruses - 1015; Other Eukaryotes - 8892 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11166658..11167500 | ||||||||||||||||||||
| Molecular Weight (calculated) | 17174.50 Da | ||||||||||||||||||||
| IEP (calculated) | 10.19 | ||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||
| Length | 165 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANQYFRMAF LLCLFLSLSY QSIRIEAREG KACIGNCYGS SAPPVPPNAS LSIPPNSSPS VKLTPPYASP SVKLTPPYAS PSVRPAGTTP NASPSVKLTP 101: PYASPSMRPA GTPNASPSVK LTPPYASPSV RPTGTTPNAS PSLTPPNPSP SEKFIPPNAS PFIHT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)