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AT1G30550.2
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.991
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G45231.2); Has 993 Blast hits to 983 proteins in 439 species: Archae - 68; Bacteria - 468; Metazoa - 130; Fungi - 137; Plants - 48; Viruses - 3; Other Eukaryotes - 139 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G30550EnsemblPlants:AT1G30550.2entrez:839935
ExpressionAtlas:F4I6D2Gene3D:3.40.50.150GeneID:839935GO:GO:0001510
GO:GO:0008168GO:GO:0009452Gramene:AT1G30550.2hmmpanther:PTHR14741
hmmpanther:PTHR14741:SF32InterPro:IPR019012InterPro:IPR029063KEGG:00253+2.1.1.-
KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-
KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-
KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-
KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-KEGG:ath:AT1G30550KO:K14292OMA:DFASEEN
Pfam:PF09445PRIDE:F4I6D2ProteinModelPortal:F4I6D2Proteomes:UP000006548
RefSeq:NP_001154386.2SMR:F4I6D2SUPFAM:SSF53335TAIR:AT1G30550
UniGene:At.40531UniProt:F4I6D2
Coordinates (TAIR10) chr1:-:10822341..10823641
Molecular Weight (calculated) 24578.60 Da
IEP (calculated) 4.53
GRAVY (calculated) -0.04
Length 221 amino acids
Sequence (TAIR10)
(BLAST) 		001: MKKEAESLIE KEHGTNPKIS RYWIQRYDLF SKYDQGIEMD EEGWYSVTPE EIAIKQAERC RGKVVIDCFS GVGGNTIQFA KVCSSVIAID IDPMKIALAM
101: NNAKVYGVAN RIDFVTGDFM QLAPSLKGDV LFLSPPWGGP TYSKVESYKL DMLLPRDGYS LFQTALSITP NIIMFLPKNI DLAQLEELAC LSSPPLTLEI
201: EENSIGGEIK AITAYFSSNV V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)