AT1G30420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.776 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : multidrug resistance-associated protein 12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of MRP subfamily | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
multidrug resistance-associated protein 12 (MRP12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 13 (TAIR:AT1G30410.1); Has 660731 Blast hits to 354373 proteins in 4073 species: Archae - 11896; Bacteria - 533971; Metazoa - 13155; Fungi - 8106; Plants - 6765; Viruses - 11; Other Eukaryotes - 86827 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10748816..10756316 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 168113.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1495 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGFEALNWYC KPIAEGFWEK TPDGAFGAYT PCAIDSLVMI VSNSVLLGLC FYRIWITLYN AKAQIYVLRK MYYHCVLWIL ACCCVVEPVL RLVMGISLFD 0101: MGDETDLPPF EVASLMVEAF AWFAMLVLIG LETKQYVKEF RWYVRFGVVY VLVADAVLLD LVLPLKNSIN RTALYLCISS RCCQALFGIL LLVYIPELDL 0201: YPDYHILNNE SLDNVEYDAL PGGVNICPER YASIFSGIYF SWMTPLMQLG YRKPITERDV WQLDQWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG 0301: RRFWLGGIFK VGHDLSQFVG PVILSHILQS MIEGDPAWVG YVYAFLIFFG VTFGVLCQSQ YFQHVGRVGF RLRSTLVAAI FHKSLRLTNK ARKNFASGKV 0401: TNMITTDANA LQLIAEQLHG LWSAPFRIIV SMVLLYQQLG VASIFGSLIL FLLIPFQTLI VRKMRKLTKE GLQWTDKRVG IIYEILASMD IVKCYAWEKS 0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTLV SFGVYVLLGG DLTPARAFTS LSLFAVLRSP LSTLPNLISQ AVNANVSLQR IEELLLSEER 0601: ILAQNPPLQP GAPAISIKNG YFSWDSKTSK PTLSDINLEI PVGSLVAIVG GTGEGKTSLI SAMLGELSHA ETSSVDIRGS VAYVPQVSWI FNATLRENIL 0701: FGSDFESERY WRAIDVTALQ HDLDLFPGRD RTEIGERGVN ISGGQKQRVS MARAVYSNSD IYIFDDPFSA LDAHVAHQVF DSCVKHELKG KTRVLVTNQL 0801: HFLPLMDRII LVSEGMIKEE GNFAELSKSG TLFKKLMENA GKMDATQEVN TNDENISKLG PTVTIDVSER SLGSIQQGKW GRSMLVKQEE RETGIISWDV 0901: VMRYNKAVGG LWVVMILLVC YLTTEVLRVL SSTWLSIWTD QSTPKSYSPG FYIVVYALLG FGQVAVTFTN SFWLISSSLH AAKRLHDAML NSILRAPMLF 1001: FETNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGIVST ISLWAIMPLL ILFYATYIYY QSTSREVRRL DSVTRSPIYA LFGEALNGLS 1101: SIRAYKAYDR MAKINGKSMD NNIRFTLAST SSNRWLTIRS ESLGGVMIWL TATFAVLRYG NAENQAVFAS TMGLLLSYTL NITTLLSGVL RQASKAENSL 1201: NSVERVGNYI DLPSEATAII ENNRPVSGWP SRGSIQFEDV HLRYRPGLPP VLHGLSFFVY PSEKVGVVGR TGAGKSSMLN ALYRIVELEK GRILIDDYDV 1301: AKFGLTDLRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAD LWEALERAHI KDVIDRNPFG LDAEVSEGGE NFSVGQRQLL SLARALLRRS KILFLDEATA 1401: SVDVRTDSLI QRTIREEFKS CTMLIIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFKMVHS TGPENGQYLS NLVFERRGNG MSQGG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)