AT1G29590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Eukaryotic initiation factor 4E protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
eukaryotic translation Initiation Factor 4E3 (eIF4E3); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1771 Blast hits to 1771 proteins in 275 species: Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 347; Plants - 383; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10339937..10341628 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32894.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.24 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.63 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 285 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEQYWALYKE LTLSHLRLLY WERTRRSIVN GKITVKRARE KEKSEMVVMD SPVSGRMADQ NIDPNTTTSP SPIEKHVSAI KAISGDEKAP SKEKKNYASK 101: KSTTVIQKSH CFQNSWTFWF DNPSSKSNQV IWGSSLRSLY TFATIEEFWS LYNNIHPPTK WVSGSDLYCF KDKIEPKWED PICANGGKWT MFFPRATLES 201: NWLNTLLALV GEQFDQGDEI CGAVLNFRTR GDRISLWTKK AANEEAQLSI GKQWKELLGY NDTIGFIVHE DAKTLDRDAK RRYTV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)