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AT1G27570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.650
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : phosphatidylinositol 3- and 4-kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27590.1); Has 394 Blast hits to 394 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 2; Plants - 290; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XP06eggNOG:ENOG410XQASeggNOG:KOG1895eggNOG:KOG2381
EMBL:CP002684EnsemblPlants:AT1G27570EnsemblPlants:AT1G27570.1entrez:839648
ExpressionAtlas:F4HSY7GeneID:839648GO:GO:0016301GO:GO:0016773
Gramene:AT1G27570.1hmmpanther:PTHR15245hmmpanther:PTHR15245:SF26InterPro:IPR000403
InterPro:IPR016024InterPro:IPR032460PaxDb:F4HSY7Pfam:PF00454
Pfam:PF11935PRIDE:F4HSY7ProteinModelPortal:F4HSY7Proteomes:UP000006548
RefSeq:NP_174077.1SMR:F4HSY7STRING:3702.AT1G27570.1SUPFAM:SSF48371
TAIR:AT1G27570UniGene:At.51792UniProt:F4HSY7
Coordinates (TAIR10) chr1:+:9575538..9582376
Molecular Weight (calculated) 73536.60 Da
IEP (calculated) 5.50
GRAVY (calculated) -0.06
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPADATTK GQALALLAAA KNHGDLAVKL SSLKEVKEIL LSLEPSLSAE IFPYLRELCL SPEVLVRRSL IEIIEEVGLR MLEHSYVLVS VLIHLVGDND
101: PTVAEKSIST GTTFFRSILE KMETQFHHRG KVDRWCVNLW TLMLMFKDAV FNIALDLEPG RVVGVKVLAL KFMETFILLI TPHASDPEKV STSSEGSRQM
201: INISSLAAGL PMLNLTGLMS EVNQTLVRLG SFLQAPTLIQ DALPIAVIDC SLSFSLAVVA RKRPVHYDTV LSVLGFLKCT SSPIVESRDL LFRAFPAMDP
301: ADISDQVVRE VDELFRVNEH AANENRSSQI LEVFPTLSSL PMQLRDHLQQ MIHWLDEAII GDMLPQYERR NDMRQVLDRD RRQRCLFKRF SDEDRARNEA
401: IAYLLDHPED GHRSQSEQIY GFSRVRRAVW VRCRIKNQMK MGVLIEFLES SVTVQSLGTV YSELPDDVGA EEIHKIVVLD IRFGNIDRNL GNLLVQAEPR
501: NGSAAHLVPI DHELSFFNDA HPYITCGACW IKWLEQIDKD FSSQLVNYVA ALDPDRDLEF LRHCGWEPNQ RYIENFTVFA TFLKKAVSQG LTALQIGLLA
601: SYKWEEDLDY NLHCIVASVQ REDNNFVESV GTRIEQRLRE FHENLHGNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)