AT1G27570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.650 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphatidylinositol 3- and 4-kinase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27590.1); Has 394 Blast hits to 394 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 2; Plants - 290; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:9575538..9582376 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73536.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.50 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||
| Length | 649 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAPADATTK GQALALLAAA KNHGDLAVKL SSLKEVKEIL LSLEPSLSAE IFPYLRELCL SPEVLVRRSL IEIIEEVGLR MLEHSYVLVS VLIHLVGDND 101: PTVAEKSIST GTTFFRSILE KMETQFHHRG KVDRWCVNLW TLMLMFKDAV FNIALDLEPG RVVGVKVLAL KFMETFILLI TPHASDPEKV STSSEGSRQM 201: INISSLAAGL PMLNLTGLMS EVNQTLVRLG SFLQAPTLIQ DALPIAVIDC SLSFSLAVVA RKRPVHYDTV LSVLGFLKCT SSPIVESRDL LFRAFPAMDP 301: ADISDQVVRE VDELFRVNEH AANENRSSQI LEVFPTLSSL PMQLRDHLQQ MIHWLDEAII GDMLPQYERR NDMRQVLDRD RRQRCLFKRF SDEDRARNEA 401: IAYLLDHPED GHRSQSEQIY GFSRVRRAVW VRCRIKNQMK MGVLIEFLES SVTVQSLGTV YSELPDDVGA EEIHKIVVLD IRFGNIDRNL GNLLVQAEPR 501: NGSAAHLVPI DHELSFFNDA HPYITCGACW IKWLEQIDKD FSSQLVNYVA ALDPDRDLEF LRHCGWEPNQ RYIENFTVFA TFLKKAVSQG LTALQIGLLA 601: SYKWEEDLDY NLHCIVASVQ REDNNFVESV GTRIEQRLRE FHENLHGNA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)