AT1G26480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.517 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : general regulatory factor 12 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
14-3-3 protein GF14iota (grf12) | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:9156573..9157845 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30546.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.54 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.72 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 268 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSSGSDKER ETFVYMAKLS EQAERYDEMV ETMKKVARVN SELTVEERNL LSVGYKNVIG ARRASWRIMS SIEQKEESKG NESNVKQIKG YRQKVEDELA 101: NICQDILTII DQHLIPHATS GEATVFYYKM KGDYYRYLAE FKTEQERKEA AEQSLKGYEA ATQAASTELP STHPIRLGLA LNFSVFYYEI MNSPERACHL 201: AKQAFDEAIA ELDTLSEESY KDSTLIMQLL RDNLTLWTSD LPEDGGEDNI KTEESKQEQA KPADATEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)