AT1G25570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Di-glucose binding protein with Leucine-rich repeat domain | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Di-glucose binding protein with Leucine-rich repeat domain; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 4 (TAIR:AT1G28340.1); Has 39900 Blast hits to 11672 proteins in 418 species: Archae - 2; Bacteria - 388; Metazoa - 87; Fungi - 9; Plants - 38059; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8992183..8995430 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68976.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.10 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||
| Length | 628 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPFSPSFFLF LSSFFLLLHL SLSSPFNTSF FIDCGSPETS TDVFNRTWLP DQFYSGGSTA VVSEPLRFHL IAEKTIRYFP LSFGKKNCYV VPLPPGRYYL 101: RTFTVYDNYD GKSHSPSFDV SVEGTLVFSW RSPWPESLLR DGSYSDLFAF IGDGELDLCF YSIATDPPIV GSLEVLQVDP SSYDADGTGQ NVLLVNYGRL 201: SCGSDQWGPG FTNHTDNFGR SWQSDEDFRS EDSRSVARSL STLEKIKGVD QAPNYFPMKL YQTAVTVSGG GSLVYELEVD AKLDYLLWFH FSEIDSTVKK 301: AGQRVFDLVV NDNNVSRVDV FHEVGGFAAY SLNYTVKNLS STIVTVKLSS VSGAPIISGL ENYAIVPADM ATVPEQVTAM KALKDSLRVP DRMGWNGDPC 401: APTSWDAWEG VSCRPNSQGS ALVIFQIDLG SQGLKGFISE QISLLTNLNS LNLSSNTLSG QLPLGLGHKS LVSLDLSNNQ LTGPIPESLT LSSLKLVLLN 501: GNELQGKVPE EVYSVGVHGG IIDLSGNKGL CGVPSLPTCP LLWENGHLSK GGKIAIAISC VVFLILVFLV IYLCCIWRGR HDYDFAPPHD LTSLAAKRNR 601: YQRQKSLMLL EMESQHAKGM PTLPLNSQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)