AT1G24240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ribosomal protein L19 family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT4G11630.1); Has 7931 Blast hits to 7931 proteins in 2663 species: Archae - 0; Bacteria - 5364; Metazoa - 103; Fungi - 54; Plants - 151; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8586431..8587970 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25069.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 11.28 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||
| Length | 222 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQLIRGSTRL LQRHRFSISN TLPFTSSSCG SWSANESRKL GFDSFPSTRA ATYLISSLKN AGFSSLAVVP KQNFSSRCFS TTGDSVQGSP ESDCVVPQRI 101: KFKRLDKTAK HIMQIVDKEA VEEVRTLREI PEIKPGYIVQ LKVEVPENKR RVSIVKGVVI ARRNAGLNST FRIRRLVAGV GVESMFPLYS PNLRVIKVVD 201: KKKVRRAKLY YLREKVNALK KH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)