AT1G24030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.784 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 120319 Blast hits to 118974 proteins in 4454 species: Archae - 114; Bacteria - 14029; Metazoa - 43843; Fungi - 10580; Plants - 33748; Viruses - 447; Other Eukaryotes - 17558 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8503394..8505195 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42543.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.74 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 375 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHFPLVSAWN KRRRSKSYDT DPCTFLFSII FARWHKRVYR TAECWQIEDQ ASQPRKRRFG SSVYTLKEME EATSSFSDEN LLGKGGFGRV YQGTLKTGEV 101: VAIKKMDLPT FKKADGEREF RVEVDILSRL DHPNLVSLIG YCADGKHRFL VYEYMQNGNL QDHLNGIKEA KISWPIRLRI ALGAAKGLAY LHSSSSVGIP 201: IVHRDFKSTN VLLDSNYNAK ISDFGLAKLM PEGKDTCVTA RVLGTFGYFD PEYTSTGKLT LQSDIYAFGV VLLELLTGRR AVDLTQGPNE QNLVLQVRNI 301: LNDRKKLRKV IDVELPRNSY SMEAITMFAD LASRCIRIES KERPSVMDCV KELQLIIYTN SKGGLGGTIP TFRRL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)