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AT1G23110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFBEeggNOG:ENOG4112DAUEMBL:AY648308EMBL:CP002684
EnsemblPlants:AT1G23110EnsemblPlants:AT1G23110.1EnsemblPlants:AT1G23110.2EnsemblPlants:AT1G23110.3
EnsemblPlants:AT1G23110.4EnsemblPlants:AT1G23110.5entrez:838919GeneID:838919
Gramene:AT1G23110.1Gramene:AT1G23110.2Gramene:AT1G23110.3Gramene:AT1G23110.4
Gramene:AT1G23110.5hmmpanther:PTHR35100hmmpanther:PTHR35100:SF1KEGG:ath:AT1G23110
OMA:NTKVYANPhylomeDB:Q6DSU0Proteomes:UP000006548RefSeq:NP_001117336.1
RefSeq:NP_001117337.1RefSeq:NP_001185068.1RefSeq:NP_001185069.1RefSeq:NP_173724.2
STRING:3702.AT1G23110.1TAIR:AT1G23110UniGene:At.41569UniGene:At.50783
UniProt:Q6DSU0
Coordinates (TAIR10) chr1:-:8196608..8197665
Molecular Weight (calculated) 27328.20 Da
IEP (calculated) 9.94
GRAVY (calculated) 0.00
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLQNVSKSS NALEGIHGVH VTSHSPFSFE KTTQVSDFQT NTKSSVMESN QRLSIERFWQ QRPPCLRPIC CSIRGDQSVL ETAANVATSL PFIFLGMQAP
101: RKNLNTKVYA NSLIGVGIAS SLYHASRGKL RKYLRWVDYT MIATTTICLS RALRNENPKF LMAASALVLP FQPLMVSAVH TGMMEVAFAK RSLKDPDLKT
201: AHNVHKMSSL LGGALFIADD FFPETPFLHA GWHLAAAIGV GTCNKLLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)