AT1G22720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.870 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding (InterPro:IPR001881), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 4 (TAIR:AT1G21210.1); Has 17182 Blast hits to 16977 proteins in 349 species: Archae - 4; Bacteria - 9; Metazoa - 1405; Fungi - 31; Plants - 15495; Viruses - 26; Other Eukaryotes - 212 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8044232..8045665 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24241.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.11 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 219 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIIKSSAHST GNPYVLNGCK DIDECKELAN GRPNICTDGG TCQNSPESYR CDLRDQKESD DPHLCRTTIG VLIVLLVIVS CIKQKIKHRK DIELRQIFFE 101: QNGGGMLIHR LSGSGPSNVD VKIFTEEAMK EATNSYDESR ILGQGGQGKV YKGILSDNFI VAIKKARLGD SSQVEHFINE VLILSQINHM NVIKILGCCL 201: EIELFLLQLA LGSLVIRHS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)