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AT1G22720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.870
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding (InterPro:IPR001881), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 4 (TAIR:AT1G21210.1); Has 17182 Blast hits to 16977 proteins in 349 species: Archae - 4; Bacteria - 9; Metazoa - 1405; Fungi - 31; Plants - 15495; Viruses - 26; Other Eukaryotes - 212 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G22720EnsemblPlants:AT1G22720.1entrez:838878
Gene3D:2.60.120.200GeneID:838878GO:GO:0004672GO:GO:0005509
GO:GO:0005524Gramene:AT1G22720.1hmmpanther:PTHR27005hmmpanther:PTHR27005:SF32
InParanoid:F4I2Z2InterPro:IPR000719InterPro:IPR001881InterPro:IPR011009
InterPro:IPR013320InterPro:IPR018097KEGG:ath:AT1G22720OMA:CKELANG
PaxDb:F4I2Z2Pfam:PF00069Pfscan:PS50011PROSITE:PS01187
PROSITE:PS50011ProteinModelPortal:F4I2Z2Proteomes:UP000006548RefSeq:NP_173686.1
scanprosite:PS01187SMART:SM00179SMR:F4I2Z2SUPFAM:SSF56112
TAIR:AT1G22720UniGene:At.51728UniProt:F4I2Z2
Coordinates (TAIR10) chr1:-:8044232..8045665
Molecular Weight (calculated) 24241.50 Da
IEP (calculated) 7.11
GRAVY (calculated) -0.11
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MIIKSSAHST GNPYVLNGCK DIDECKELAN GRPNICTDGG TCQNSPESYR CDLRDQKESD DPHLCRTTIG VLIVLLVIVS CIKQKIKHRK DIELRQIFFE
101: QNGGGMLIHR LSGSGPSNVD VKIFTEEAMK EATNSYDESR ILGQGGQGKV YKGILSDNFI VAIKKARLGD SSQVEHFINE VLILSQINHM NVIKILGCCL
201: EIELFLLQLA LGSLVIRHS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)