AT1G19580.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : gamma carbonic anhydrase 1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6774937..6776845 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23982.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.63 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||
| Length | 220 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI 101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEF LVLRILLLYL DRTYLIHFSD 201: ALTDYKCMGR KPSKVPQEAH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)