AT1G18410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.541 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73860.1); Has 112609 Blast hits to 62495 proteins in 2699 species: Archae - 1262; Bacteria - 14877; Metazoa - 53219; Fungi - 10109; Plants - 7005; Viruses - 364; Other Eukaryotes - 25773 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:6336528..6342460 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 128014.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.39 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1140 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MLESEFQREH AFESATEQEL TCPISDNLHE SVEADDDSVQ MLDNLTLNTN PAESCESEEI QTKALPSSSS GQDLVASDED SEDVELGDTF YSCSELLQRN 0101: CCVLPYKAQK KTKENPFDFD VRTWSSPCDF PRFGEMILLS PVLNPMPFFS CCTKRAIFCS SPGSSHGGST PRSPFSPSSP RERHNKGLAD SRFQRPLPNS 0201: SALDPSSPGS MLHGGHKSHE AFQMKQGRFD LQAAKISELM KSNNLDNAPT QSLLSIVNGI LDETIERKNG ELPQRVACLL RKVVQEIERR ISTQSEHLRT 0301: QNSVFKAREE KYQSRIKVLE TLASGTSEEN ETEKSKLEEK KKDKEEDMVG IEKENGHYNL EISTLRRELE TTKKAYEQQC LQMESKTKGA TAGIEDRVKE 0401: LEQMRKDASV ARKALEERVR ELEKMGKEAD AVKMNLEEKV KELQKYKDET ITVTTSIEGK NRELEQFKQE TMTVTTSLEA QNRELEQAIK ETMTVNTSLE 0501: AKNRELEQSK KETMTVNTSL KAKNRELEQN LVHWKSKAKE MEEKSELKNR SWSQKELSYR SFISFQCQAL QELRFYSKSI KQEILKVQDK YTVEFSQLGK 0601: KLLELGDAAA NYHEVLTENQ KLFNELQELK GNIRVYCRVR PFLRGQGASK TVVEHIGDHG ELVVLNPTKP GKDAHRKFRF NKVYSPASTQ AEVFSDIKPL 0701: IRSVLDGYNV CIFAYGQTGS GKTYTMTGPD GASEEEWGVN YRALNDLFRI SQSRKSNIAY EVGVQMVEIY NEQVRDLLSG ILSTTQQNGL AVPDASMYPV 0801: TSTSDVLELM SIGLQNRVVS STALNERSSR SHSIVTVHVR GKDLKTGSAL YGNLHLVDLA GSERVDRSEV TGDRLKEAQH INKSLSALGD VIFSLASKSS 0901: HVPYRNSKLT QLLQSSLGGR AKTLMFVQLN PDITSYSESM STLKFAERVS GVELGAAKSS KDGRDVRELM EQDTIARKDD EIERLHLLKD INYPQRLQKK 1001: SLGQSDDFNS EAGDSQLSIE DDSRFQHDYT RQSRHSVTDG EALASSTDAE YDDETEGSTD APCAAEGRKP LKISDKPKPV TPRSNTTTSR PLDKLKQVTM 1101: RTTNIAKATS ALLSPSSQGM KKTGSASNFL KSPKDSKRWS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)