AT1G17430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.803 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G72620.1); Has 4935 Blast hits to 4934 proteins in 1109 species: Archae - 58; Bacteria - 3571; Metazoa - 147; Fungi - 8; Plants - 323; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5982310..5983919 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37854.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.06 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||
| Length | 332 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASMKHVHLF RRYLSIVFTL FQRLISCFFD FPILIKIADS FLSLYFLVFC DLRPVTVDLD DGETTVHFWI SGHRRISRQN LVMLHGYGGN SKWQFVHQVS 101: DLSKSFNLFI PDLVFFGKSY SKNRDRSVEI QARSVVGGLK KLGCVEGGGG ISIYSISYGG FVAYKMAEIW PAMVEKLVIV SSGVGFTQQQ KTAELKKHGG 201: DCSKILVPKT PMDLRLLIKI SMNTGLTFVD WVPDFFLSQF IAVMYEKNRQ ELLELAKNLL EREEEPELPV ISQKTLIVWG DKDKVFPLEH AYRLQRHLQS 301: SRLEIIKETG HAVNIEAPTT LNNFITSFVL SA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)