AT1G16820.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.285 golgi 0.228 What is SUBAcon? |
|
||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit A (TAIR:AT1G78900.2). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:5757199..5758202 | ||||||||||||||||||||
| Molecular Weight (calculated) | 7387.69 Da | ||||||||||||||||||||
| IEP (calculated) | 7.78 | ||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||
| Length | 66 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
1: MATFASYDKF SPSYKSVWMM RNIIHFYNLA NQAIDRAAGV DGSDGYLHSH QTSLGRSFLP LSVSEV | ||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)